Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836126.1_cds_XP_016506196.1_19447
CDS Infomation

[gene=LOC107823994] [db_xref=GeneID:107823994] [protein=actin-related protein 5-like isoform X2] [protein_id=XP_016506196.1] [location=complement(join(8352..8852,8943..9288,9473..9600,9822..10253,10320..10410,10496..10605,12170..12279,12561..12603))] [gbkey=CDS]
Sequence

ATGGCTGAGCTTCTTTTTGAGTCATATGGAGTTCCTTCAGTAGCATTTGGTGTAGATGCT
GCATTCAGCTATAAATACAACCAACAGCTTGGAATTTGCAAAGATATAGGTCTTGCAATA
AGCTCAGGATTTACTACAAGTCATGTCATTCCGTTTATTAACGGAGAACCTGTCTATGAA
GCGTGCTGTCGAACTAATGTTGGTGGATACCATGTCACTGATTATCTGAAGCAGCTTCTT
TCACTCAAGCACCCTCATCACATATCAAAGCTTACATGGGAAAAGGTTGAAGAACTGAAG
ATGGAATACTGTTACATAGCTGCAGACTATGCTTCAGAGGTTCAATTATTTCAGGGGGGA
GATAAGGAAGCTGAAGAAAAGACCAGATGTTGGCAGCTTCCTTGGACTCCATCACCAGCC
GATGATCCTCCATCAGAAGAAGAACTTGCTAGAAAGGCGGCTTTGAAGGAAAAACAAAGT
CAAAGATTGCGTGAGATGGCTGAAGCGAAAAGATCCTCAAAAATAAATGAACTTGAAAAT
GAATTAAAAGGTTTGGAATTCCTCTTAGAGGAGCTCAAGGACACTGAGGATGACCAAATT
GTGTCGTTCCTTGCAAGTAGAGGTTATGCTTCTAAACGTGAAGTGGAAGCTGCTTTTGCA
AAAGTTACTCAAACACTTCGGAAGGCCAAGGGTGAGCAAGTTCCTAGTGACGAGAAAGCA
GATGCTTCTGCAGCTGAGAAGTATTATCTTATTGATATACCTGATGAAGAACTTTCAGCA
GAGCAGCTCAAGGAGAAGAGAAGACAAGTGTTTCTGAAGTCCACAACTGAAGCACGGCAG
CGAGCTAAACAAAAGCGTTTGGAGGAGGAGTTAGAAAAGGAGAAGGAAAAGAAACTTGAG
GAACAAAGGCGCCTGGAAAACCCAGAACGCTATACGGAGCAGTTGCGAGCCAAATACAAA
GAGCTGTCGGAAAAACTTGAGCAGCGAAAGCGATTGAAGACAAGTGGGAACCATGCAAAT
GGCAATAATAATGTTTCTGGAGGTGTCGGTCGTGGGGAGAGGTTGAATGCTGCCCAAAGG
GAGAGGATGCGCTTGTTAACCACGGCAGCATTTGATCGAGGGAAAGGTGAAGATACTTTT
GGTCAAAGGGATGAAGATTGGCAACTCTACAAGCTAATGAGTAGAGATAATGATGATGAT
GACGATGATAAGCCAGATCAGGATGAAGCTGAGTTGGCTCGCATCTCCTCTAGGCTTCAG
GAGATCGACCCTTCGTTTTTCCCAGGATCAGAGTCTGGAGCCTCTGCCTCAGAGGTGCCA
CGTTTCCGTCCTCTAACAAAGGAGGATTTTCAAATCATACTTGGGGTTGAAAGATTTAGA
TGTCCTGAAGTTCTATTCAAACCCAACTTAATTGGAATTGACCAGTCAGGGTTGGATGAA
ATGGTTGGAGTGTCTTTGAGAAGATTGCCTACTTGGGGACAAGGCTTGGGGGATAAAATG
ACAACTTCAATACTTATGACTGGCGGGAGTTGTCTCTACCCAGGTATGGCTGAGCGCTTG
GAAGCAGGAATTCGGATGATCAGGCCATGTGGAACTCCTATAAAGGTTCTCAGAGCAACA
GATCCAATTATGGATGCATGGCGAGGTGCTTCAACGTATGCTGCTGCTATGCAATTCCCA
CAGCAAACATTCAGTAGAATGGATTACTATGAAAAAGGTGAAGATTGGCTTCGTAGATAT
AAGTTCAGATACAGGATCTAA

Peptide Sequence

PEP ID

XP_016506196.1
PEP Infomation

PREDICTED: actin-related protein 5-like isoform X2 [Nicotiana tabacum]
Sequence

MAELLFESYGVPSVAFGVDAAFSYKYNQQLGICKDIGLAISSGFTTSHVIPFINGEPVYE
ACCRTNVGGYHVTDYLKQLLSLKHPHHISKLTWEKVEELKMEYCYIAADYASEVQLFQGG
DKEAEEKTRCWQLPWTPSPADDPPSEEELARKAALKEKQSQRLREMAEAKRSSKINELEN
ELKGLEFLLEELKDTEDDQIVSFLASRGYASKREVEAAFAKVTQTLRKAKGEQVPSDEKA
DASAAEKYYLIDIPDEELSAEQLKEKRRQVFLKSTTEARQRAKQKRLEEELEKEKEKKLE
EQRRLENPERYTEQLRAKYKELSEKLEQRKRLKTSGNHANGNNNVSGGVGRGERLNAAQR
ERMRLLTTAAFDRGKGEDTFGQRDEDWQLYKLMSRDNDDDDDDKPDQDEAELARISSRLQ
EIDPSFFPGSESGASASEVPRFRPLTKEDFQIILGVERFRCPEVLFKPNLIGIDQSGLDE
MVGVSLRRLPTWGQGLGDKMTTSILMTGGSCLYPGMAERLEAGIRMIRPCGTPIKVLRAT
DPIMDAWRGASTYAAAMQFPQQTFSRMDYYEKGEDWLRRYKFRYRI

Transcript Sequence

Gene sequence data has not been registered.